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Laboratory of Plant-Microbe Interactions - LIPM

Laboratory of Plant-Microbe Interactions

Publications - Symbiotic functions, genome and evolution of rhizobia

Publications (5 last years)

  • Marchetti M , Clerissi C, Yousfi Y, Gris C, Bouchez O, Rocha E, Cruveiller S,Jauneau A, Capela D and Masson-Boivin C.(2016)  Experimental evolution of rhizobia may lead to either extra- or intracellular symbiotic adaptation depending on the selection regime. Mol Ecol, doi: 10.1111/mec.13895
  • Remigi P, Zhu J, Young JPW and C Masson-Boivin. 2016. Symbiosis within Symbiosis: Evolving Nitrogen-Fixing Legume Symbionts. Trends Microbiol. 24:63–75
  • Remigi P, Capela D, Clerissi C, Tasse L, Torchet R, Bouchez O, Batut J, Cruveiller S, Rocha E PC and Masson-Boivin C. (2014).Transient Hypermutagenesis Accelerates the Evolution of Legume Endosymbionts Following Horizontal Gene Transfer. PLoS Biology, 12(9): e1001942.
    PubMed
  • Marchetti M, Jauneau A, Capela D, Remigi P, Gris C, Batut J and Masson-Boivin C. (2014) Shaping bacterial symbiosis with legumes by experimental evolution. Mol Plant Microbe Interact. 27 : 956–964.
    PubMed
  • Roux B, Rodde N, Jardinaud MF, Timmers T, Sauviac L, Cottret L, Carrère S, Sallet E, Courcelle E, Moreau S, Debellé F, Capela D, de Carvalho-Niebel F, Gouzy J, Bruand C, Gamas P. (2014) An integrated analysis of plant and bacterial gene expression in symbiotic root nodules using laser capture microdissection coupled to RNA-seq. Plant J., 77(6):817-37.
    PubMed
  • Selami N, Auriac MC, Catrice O, Capela D, Kaid-Harche M, Timmers T. (2014) Morphology and anatomy of root nodules of Retama monosperma (L.)Boiss. Plant Soil, 379:109-119.
  • Mathieu-Demazière C, Poinsot V, Masson-Boivin C, Garnerone AM and J Batut. 2013. Biochemical and functional characterization of SpdA, a 2′, 3′cyclic nucleotide phosphodiesterase from Sinorhizobium meliloti . BMC Microbiology, 13:268 doi:10.1186/1471-2180-13-268.
    PubMed
  • Guan SH, Gris C, Cruveiller S, Pouzet C, Tasse L, Leur A, Maillard A, Medigue C, Batut J, Masson-Boivin C and C Capela. Experimental evolution of nodule intracellular infection in legume symbionts.The ISME Journal doi:10.1038/ismej.2013.24 
    PubMed
  • Sallet E, Roux B, Sauviac L, Jardinaud MF, Carrère S, Faraut T, de Carvalho-Niebel F, Gouzy J, Gamas P, Capela D, Bruand C, Schiex T. (2013) Next Generation Annotation of prokaryotic genomes with EuGene-P: application to Sinorhizobium meliloti 2011. DNA Res., 20(4):339-54.
    PubMed
  • Marchetti M, Capela C, Poincloux R, Benmeradi N, Auriac MC, Le Ru A, Maridonneau-Parini I, Batut J, and C Masson-Boivin. 2013. Queuosine biosynthesis is required for Sinorhizobium meliloti-induced cytoskeletal modifications on HeLa cells and symbiosis with Medicago truncatula. PLOS ONE 10.1371/journal.pone.0056043.
    PubMed
  • Saad M, Crèvecoeur M, Masson-Boivin C, and X Perret. 2012. The T3SS of Cupriavidus taiwanensis strain LMG19424 compromizes symbiosis with Leucaena leucocephala. Appl. Environ. Microbiol.; 78:20 7476-7479.
    PubMed
  • Tian CF, Garneronne AM, Mathieu-Demazière C, Masson-Boivin C and J Batut. 2012. Plant-activated Bacterial Receptor Adenylate Cyclases Modulate Epidermal Infection in the Sinorhizobium meliloti-Medicago Symbiosis. Proc Nat Acad Sci USA. doi/10.1073/pnas.1120260109.
    PubMed
  • Batut, J., Mergaert, P. and Masson-Boivin, C. (2011). Peptide signalling in the rhizobium-legume symbiosis. Cur Op Microbiol14:181-187.
    PubMed
  • Marchetti, M., Catrice, O., Batut, J. and Masson-Boivin, C. (2011). Cupriavidus taiwanensis bacteroids in Mimosa pudica indeterminate nodules are not terminally differentiated. Appl Env Microbiol 77 :2161-2164.
    PubMed
  • Marchetti, M., Capela, D., Glew, M., Cruveiller, S., Chane-Woon-Ming, B., Gris, C., Timmers, T., Poinsot, V., Gilbert, L.B., Heeb, P., Médigue, C., Batut, J. and Masson-Boivin, C. (2010) Experimental evolution of a plant pathogen into a legume symbiont. PloS Biol 8(1):e1000280.
    PubMed
  • Masson-Boivin, C., Giraud, E., Perret, X. and Batut, J. (2009) Establishing nitrogen-fixing symbiosis with legumes: how many rhizobium recipes? Trends Microbiol17:458-466.
    PubMed
  • Becker, A., Barnett, M.J., Capela, D., Dondrup, M., Kamp, P.B., Krol, E., Linke, B., Rüberg, S., Runte, K., Schroeder, B.K., Weidner, S., Yurgel, S.N., Batut, J., Long, S.R., Pühler, A., and Goesmann, A. (2009) A portal for rhizobial genomes: RhizoGATE integrates a Sinorhizobium meliloti genome annotation update with postgenome data. J Biotechnol  140:45-50.
    PubMed
  • Amadou, C., Pascal, G., Mangenot, S., Glew, M., Bontemps, C., Capela, D., Carrère, S., Cruveiller, S., Dossat, C., Lajus, A., Marchetti, M., Poinsot, V., Rouy, Z., Servin, B., Saad, M., Schenowitz, C., Barbe, V., Batut, J., Médigue, C., and Masson-Boivin, C. (2008) Genome sequence of the beta-rhizobium Cupriavidus taiwanensis and comparative genomics of rhizobia. Genome Res 18:1472-83.
    PubMed
  • Peltzer, M., Roques, N., Poinsot, V., Aguilar, O.M., Batut, J. and Capela, D. (2008) Auxotrophy accounts for nodulation defect of most Sinorhizobium meliloti mutants in the branched-chain amino acid biosynthesis pathway. Mol Plant Microbe Interact21:1232-41.
    PubMed

 Other selected publications

  • Batut, J., Andersson, S.G.E., O'Callaghan, D. (2004) The evolution of chronic infection strategies in the α-proteobacteria. Nature Rev Microbiol2, 933-945.
    PubMed
  • Capela, D., Barloy-Hubler, F., Gouzy, J., Bothe, G., Ampe, F., Batut, J., Boistard, P., Becker, A., Boutry, M., Cadieu, E., Dreano, S., Gloux, S., Godrie, T., Goffeau, A., Kahn, D., Kiss, E., Lelaure, V., Masuy, D., Pohl, T., Portetelle, D., Puhler, A., Purnelle, B., Ramsperger, U., Renard, C., Thebault, P., Vandenbol, M., Weidner, S., Galibert, F.  (2001) Analysis of the chromosome sequence of the legume symbiont Sinorhizobium meliloti strain 1021. Proc NatL Acad Sci USA98: 9877-9882.
    PubMed
  • Galibert, F., Finan, T.M., Long, S.R., Puhler, A., Abola, P., Ampe, F., Barloy-Hubler, F., Barnett, M.J., Becker, A., Boistard, P., Bothe, G., Boutry, M., Bowser, L., Buhrmester, J., Cadieu, E., Capela, D., Chain, P., Cowie, A., Davis, R.W., Dreano, S., Federspiel, N.A., Fisher, R.F., Gloux, S., Godrie, T., Goffeau, A., Golding, B., Gouzy, J., Gurjal, M., Hernandez-Lucas, I., Hong, A., Huizar, L., Hyman, R.W., Jones, T., Kahn, D., Kahn, M.L., Kalman, S., Keating, D.H., Kiss, E., Komp, C., Lalaure, V., Masuy, D., Palm, C., Peck, M.C., Pohl, T.M., Portetelle, D., Purnelle, B., Ramsperger, U., Surzycki, R., Thebault, P., Vandenbol, M., Vorholter, F.J., Weidner, S., Wells, D.H., Wong, K., Yeh, K.C., Batut, J. (2001) The composite genome of the legume symbiont Sinorhizobium meliloti. Science, 293: 668-672.
    PubMed
  • Moulin, L., Munive, A., Dreyfus, B., Boivin-Masson, C. (2001) Nodulation of legumes by members of the β-subclass of proteobacteria. Nature 411, 948. 
    PubMed