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Laboratory of Plant-Microbe Interactions - LIPM

Laboratory of Plant-Microbe Interactions

Publications - Infectious strategies of Xanthomonas

Publications

2017
  • Cerutti A., Auriac M-C., Noël L.D. and Jauneau A. (2017) Histochemical Preparations to Depict the Structure of Cauliflower Leaf Hydathodes. Bio-protocol. 7(20): e2452.
  • Cerutti A. and Jauneau A. (2017) Capturing z-stacked confocal images of stomata to visualize bacteria in the pore. Bio-protocol. 7(20): e2451.
  • Cerutti A.*, Jauneau A.*,Auriac M-C., Lauber E., Martinez Y., Chiarenza S., Leonhardt N., Berthomé R. and Noël L.D. (2017) Immunity at cauliflower hydathodes controls infection by Xanthomonas campestris pv. campestris. Plant Physiol. 174(2):700-716.
    PubMed
2016
  • Robène I., Bolot S., Pruvost O., Arlat M., Noël L.D., Carrère S., Jacques M.-A., Koebnik R and Gagnevin L. (2016) High-quality draft genome sequences of two Xanthomonas pathotype strains infecting aroid plants. Genome Announcement. 4(5):e00902-16. PDF (open Access)
  • Boulanger A. and Noël L.D. (2016) Xanthomonas whole genome sequencing: phylogenetics, host specificity and beyond. Front. Microbiol. 7:1100. PDF (open Access)
  • French Network on Xanthomonads (Jacques M.-A., Arlat M., Boulanger A., Boureau T., Carrère S., Cesbron S., Chen N., Cociancich S., Darrasse A., Denancé N., Fischer-Le Saux M., Gagnevin L., Koebnik R., Lauber E., Noël L.D., Pieretti I., Portier P., Pruvost O., Rieux A., Robène I., Royer M., Szurek B., Verdier V., and Vernière C.) (2016) Ecology, Physiology, and Genomics to Understand Host Specificity in Xanthomonas. Annual review of phytopathology 54: 163-187.
    PubMed
  • Denancé N., Lahaye T. and Noël L.D. (2016) Editorial: Genomics and effectomics of the crop killer Xanthomonas. Front. Plant Sci.7:71. PDF (open Access)
2015
  • Roux B.*, Bolot S.*, Guy E., Denancé N., Lautier M., Jardinaud M.-F., Fischer-Le Saux M.,Portier P., Jacques M.-A., Gagnevin L., Pruvost O., Lauber E., Arlat M., Carrère S., Koebnik R. and Noël L.D. (2015) Genomics and transcriptomics of Xanthomonas campestris species challenges the concept of core type III effectome. BMC Genomics. 16:975. PDF (open Access)
  • Wang G.*, Roux B.*, Feng F.*, Guy E., Li L., Li N., Zhang X., Lautier M., Jardinaud M.-F., Chabannes M., Arlat M., Chen S., He C., Noël LD.* and Zhou J.-M.* (2015) The Decoy Substrate of a Pathogen Effector and a Pseudokinase Specify Pathogen-Induced Modified-Self Recognition and Immunity in Plants. Cell Host & Microbe 18(3):285-295.
    PubMed
  • Pesce C., Bolot S., Berthelot E., Bragard C., Cunnac S., Fisher-Le Saux M., Portier P., Arlat M., Gagnevin L., Jacques M-A., Noël LD., Carrère S., and Koebnik R. (2015) Draft genome sequence of the Xanthomonas translucens pv. cerealis Pathotype Strain CFBP 2053. Genome Announcement. e1174-15. PDF (open Access)
  • Bolot S.*, Cerutti A.*, Carrère S., Arlat M., Fischer-Le Saux M., Portier P., Poussier S., Jacques M-A., Noël LD. (2015) Genome sequences of the race 1 and race 4 Xanthomonas campestris pv. campestris strains CFBP 1869 and CFBP 5817. Genome Announcement. e01023-15. PDF (open Access)
  • Solé M., Scheibner F., Hoffmeister AK., Hartmann N., Hause G., Rother A., Jordan M., Lautier M., Arlat M., Büttner D. (2015) Xanthomonas campestris pv. vesicatoria secretes proteases and xylanases via the Xps-type II secretion system and outer membrane vesicles. J. Bact. 197(17):2879-93.
    PubMed
  • Dupoiron S., Zischek C., Ligat L., Carbonne J., Boulanger A., Dugé de Bernonville T., Lautier M., Rival P., Arlat M., Jamet E., Lauber E.*, Albenne C. (2015) The N-glycan cluster from Xanthomonas campestris pv. campestris: a toolbox for sequential plant N-glycan processing. J Biol Chem. 290(10):6022-6036. *corresponding author.
    PubMed
  • Pesce C.*, Bolot S.*, Cunnac S., Portier P., Fisher-Le Saux M., Jacques M-A., Gagnevin L., Arlat M., Noël LD., Carrère S., Bragard C. and Koebnik R. (2015) High-Quality Draft Genome Sequence of the Xanthomonas translucens pv. cerealis Pathotype Strain CFBP 2541. Genome Announcement. 3(1):e01574-14. PDF (open Access)
2014
  • Boulanger A., Zischek C., Lautier M., Jamet S., Rival P., Carrère S., Arlat M. and Lauber E. (2014) The plant pathogen Xanthomonascampestris pv. campestris exploits N-acetylglucosamine during infection. mBio 5(5):e01527-14. PDF (open Access)
  • Indiana A., Briand M., Arlat M., Gagnevin L., Koebnik R., Noël LD., Portier P., Darrasse A. and Jacques M.-A. (2014) Draft genome sequence of the flagellated Xanthomonas fuscans subsp. fuscans strain CFBP 4884. Genome Announcement. 2(5):e00966-14. PDF (open Access)
  • Gagnevin L.,Bolot S., Gordon JL., Pruvost O., Vernière C., Robène I., Arlat M., Noël LD., Carrère S., Jacques M-A. and Koebnik R. Draft genome sequence of Xanthomonasaxonopodis pv. allii strain CFBP 6369. Genome Announcements. 2(4):e00727-14. PDF (open Access)
  • Dugé de Bernonville T., Noël LD., SanCristobal M., Danoun S., Becker A., Soreau P., Arlat M. and Lauber E. (2014) Transcriptional reprogramming and phenotypical changes associated with growth of Xanthomonas campestris pv. campestris in cabbage xylem sap. FEMS Microbiol Ecol. 89: 527-541.
    PubMed
  • Roux F., Noël LD. Rivas S. and Roby D. (2014) ZRK atypical kinases: emerging signaling components of plant immunity. New phytologist: 203:713-716. PDF (open Access)
  • Denancé N., Szurek B. and Noël LD. (2014) Emerging functions of nodulin-like proteins in non nodulating plant specie, Plant Cell Physiology. 55(3):469-74.
    PubMed
2013
  • Darrasse A*, Bolot S*, Serres-Giardi L, Charbit E, Boureau T, Fisher-Le Saux M, Briand M, Arlat M, Gagnevin L, Koebnik R, Noël LD, Carrère S, Jacques MA (2013) High-quality draft genome sequences of Xanthomonasaxonopodis pv. glycines strains CFBP 2526 and CFBP 7119. Genome Announcement. 1(6):e01036-13. PDF (open Access)
  • Jacques MA*, Bolot S*, Charbit E, Darrasse A, Briand M, Arlat M, Gagnevin L, Koebnik R, Noël LD, Portier P, Carrère S, Boureau T. (2013) High-quality draft genome sequence of Xanthomonasalfalfae subsp. alfalfae strain CFBP 3836. Genome Announcement. 1(6):e01035-13. PDF (open Access)
  • Darrasse A., Carrère S., Barbe V., Boureau T., Arrieta-Ortiz ML., Bonneau S., Briand M., Brin C., Cociancich S., Durand K., Fouteau S., Gagnevin L., Guérin F., Guy E., Indiana A., Koebnik R., Lauber E., Munoz A., Noël LD., Pieretti I., Poussier S., Pruvost O., Robène-Soustrade I., Rott P., Royer M., Serres-Giardi L., Szurek B., Van Sluys M.-A., Verdier V., Vernière C., Arlat M., Manceau C. and  Jacques M.-A. (2013) Genome sequence of Xanthomonas fuscans subsp. fuscans strain 4834-R reveals that flagellar motility is not a general feature of xanthomonads. BMC genomics 14:761. PDF (open Access)
  • Arrieta-Ortiz ML., Rodríguez-R LM., Pérez-Quintero ÁL., Poulin L., Díaz AC., Arias Rojas N., Bart R., Boch J., Boureau T., Darrasse A., David P., Dugé de Bernonville T., Fontanilla P., Gagnevin L., Guérin F., Jacques M-A., Lauber E., Lefeuvre P., Medina C., Medina E., Montenegro N., Muñoz Bodnar A., Noël LD., Ortiz Quiñones JF., Osorio D., Pardo C., Patil PB., Poussier S., Pruvost O., Restrepo Benavides M., Robène-Soustrade I., Ryan R., Tabima J., Trujillo C., Urrego Morales OG., Vernière C., Carrere S., Verdier V., Szurek B., Restrepo S., López C., Koebnik R. and Bernal A.(2013) Genomic survey of pathogenicity determinants and VNTR markers in the cassava bacterial pathogen Xanthomonas axonopodis pv. manihotis strain CIO15. PLoS One 8(11): e79704. PDF (open Access)
  • Noël LD., Denancé N. and Szurek B (2013) Predicting promoters targeted by TAL effectors in plant genomes: from dream to reality. Frontiers in Plant Science 4:333. PDF (open Access)
  • Bolot S.*, Munoz Bodnar A.*, Cunnac S., Ortiz E., Szurek B., Noël LD., Arlat M., Jacques M-A., Gagnevin L., Portier P., Fischer-Le Saux M., Carrere S. and Koebnik R. (2013) Draft Genome Sequence of the Xanthomonas cassavae Type Strain CFBP 4642. Genome Announcement. 1(4):e00679-13. PDF (open Access)
  • Cunnac S.*, Bolot S.*, Forero Serna N., Ortiz E., Szurek B., Noël LD., Arlat M., Jacques M-A., Gagnevin L., Carrere S., Nicole M. and Koebnik R. (2013) High-Quality Draft Genome Sequences of Two Xanthomonas citri pv. malvacearum Strains. Genome Announcement. 1(4):e00674-13. PDF (open Access)
  • Guy E., Lautier M., Chabannes M., Roux B., Lauber E., Arlat M. and Noël LD. (2013) xopAC-triggered immunity against Xanthomonas depends on Arabidopsis receptor-like cytoplasmic kinase genes PBL2 and RIPK. PLoS One. 8(8):e73469. PDF (open Access)
  • Guy E.*, Genissel A.*, Hajri A., Chabannes M., David P., Carrere S., Lautier M., Roux B., Boureau T., Arlat M., Poussier S., Noël LD. (2013) Natural Genetic Variation of Xanthomonas campestris pv. campestris Pathogenicity on Arabidopsis Revealed by Association and Reverse Genetics. mBio. 4(3):e00538-12. PDF (open Access)
  • Bolot S.*, Roux B.*, Carrere S., Jiang B.-L., J.-L. Tang, Arlat M. and Noël LD. (2013) Genome Sequences of Three Atypical Xanthomonas campestris pv. campestris Strains CN14, CN15, and CN16. Genome Announcement 1(4):e00465-13. PDF (open Access)
  • Dejean G., Blanvillain-Baufumé S., Boulanger A., Darrasse A., Girard AL., Dugé de Bernonville T., Carrere S., Jamet S., Zischek C., Lautier M., Solé M., Büttner D., Jacques MA., Lauber E. and Arlat M. (2013) The xylan utilisation system of the plant pathogen Xanthomonascampestris pv. campestris controls epiphytic life and reveals common features with oligotrophic bacteria and animal gut symbionts. New Phytol. 198(3)899-915. 
    PubMed
  • Escalon A., Javegny S., Vernière C., Noël LD., Vital K., Poussier S., Hajri A., Boureau T., Pruvost O., Arlat M. and Gagnevin L. (2013) Variations in type III effector repertoires, pathological phenotypes and host range of Xanthomonas citri pv. citri pathotypes. Mol. Plant Pathol. 14(5):483-485.
    PubMed
  • Bolot S.*, Guy E.*, Carrere S., Barbe V., Arlat M. and Noël LD. (2013) Genome Sequence of Xanthomonas campestris pv. campestris Strain Xca5. Genome Announcement 1(1):e00032-12. PDF (open Access)
2012
  • Pieretti I., Royer M., Barbe V., Carrere S., Koebnik R., Couloux A., Darrasse A., Gouzy J., Jacques M.-A., Lauber E., Manceau C., Mangenot S., Poussier S., Segurens B., Szurek B., Verdier V., Arlat M., Gabriel D.W., Rott P., Cociancich S. (2012) Genomic insights into strategies used by Xanthomonas albilineans with its reduced artillery to spread within sugarcane xylem vessels. BMC Genomics, 13:658.
    PubMed
2011
  • Ligat L.*, Lauber E.*, Albenne C., San Clemente H., Valot B., Zivy M., Pont-Lezica R., Arlat M. and Jamet E. (2011).  Analysis of the xylem sap proteome of Brassica oleracea reveals a high content in secreted proteins. Proteomics, 11: 1798-813. 
    PubMed
  • Bordes P., Lavatine L., Phok K., Barriot R., Boulanger A., Castanié-Cornet M-P., Déjean G., Lauber E., Becker A., Arlat M., and Gutierrez C. (2011). Insights into the extracytoplasmic stress response of Xanthomonas campestris pv. campestris: Role and regulation of SigmaE-dependent activity. J. Bacteriol. 193:246-64.
    PubMed
2010
  • Boulanger A., Déjean G., Lautier M., Glories M., Zischek C., Arlat M. and Lauber E. (2010). Identification and regulation of the N-acetylglucosamine utilization pathway of the plant pathogenic bacterium Xanthomonas campestris pv. campestris. J. Bacteriol. 192: 1487-97.
    PubMed
2009
  • Pieretti I., Royer M., Barbe V., Carrere S., Koebnik R., Cociancich S., Couloux A., Darrasse A., Gouzy J., Jacques M-A., Lauber E., Manceau C., Mangenot S., Poussier S., Segurens B., Szurek B., Verdier V., Arlat M., and Rott P. (2009). The complete genome sequence of Xanthomonas albilineans provides new insights into the reductive genome evolution of the xylem-limited Xanthomonadaceae. BMC Genomics, 10: 616.
    PubMed
  • Brillet K., Meksem A., Lauber E., Reimmann C. and Cobessi D. (2009). Use of an in-house approach to study the three-dimensional structures of various outer membrane proteins: structure of the alcaligin outer membrane transporter FauA from Bordetella pertussis. Acta Cryst., D65, 326-331.
    PubMed
2008
  • Xu*, R.Q., Blanvillain*, S., Feng, J.X., Jiang, B.L., Li, X.Z., Wei, H.Y., Kroj, T., Lauber, E., Roby, D., Chen, B., He, Y.Q., Lu, G.T., Tang, D.J., Vasse, J., Arlat, M., and Tang, J.L. (2008). AvrAC(Xcc8004), a type III effector with a leucine-rich repeat domain from Xanthomonas campestris pathovar campestris confers avirulence in vascular tissues of Arabidopsis thaliana ecotype Col-0. J Bacteriol 190: 343-355.
    PubMed
  • Alvarez B, Vasse J, Le-Courtois V, Trigalet-Démery D, López MM, Trigalet A. (2008) Comparative behavior of Ralstonia solanacearum biovar 2 in diverse plant species. Phytopathology. 2008 98: 59-68.
    PubMed

(* : equal contribution).